Stem-loop dps-mir-4

Accession

MI0001296

Description

Drosophila pseudoobscura dps-mir-4 precursor miRNA

Literature search

1 open access papers mention dps-mir-4
(1 sentences)

Sequence

220 reads, 2.0 reads per million, 18 experiments

uugcaauuaguuuCUUUGGUCGUCCAGCCUUAGgugauuucucugaucAUAAAGCUAGACAACCAUUGAaguucguugugg
..(((((.((((((..((((.(((.(((.((..((((((.....)))))).))))).))).))))..)))))).)))))..

Structure

uu     u      UU    C   C   C  AG      u 
  gcaau aguuuC  UGGU GUC AGC UU  gugauu c
  ||||| ||||||  |||| ||| ||| ||  |||||| u
  uguug uugaAG  ACCA CAG UCG AA  UAcuag c
gg     c      UU    A   A   -  -A      u 

Annotation confidence High

Genome context

ref|NC_046680.1|: 16472055-16472135 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dps-mir-4

Mature dps-miR-4-5p

• Accession: MIMAT0053364
• Description: Drosophila pseudoobscura dps-miR-4-5p mature miRNA
• Sequence: 14 - CUUUGGUCGUCCAGCCUUAG - 33
• Evidence: not_experimental

Mature dps-miR-4-3p

• Accession: MIMAT0001204
• Description: Drosophila pseudoobscura dps-miR-4-3p mature miRNA
• Sequence: 49 - AUAAAGCUAGACAACCAUUGA - 69
• Evidence: not_experimental

References