Stem-loop dps-mir-5

Accession

MI0001298

Description

Drosophila pseudoobscura dps-mir-5 precursor miRNA

Sequence

769 reads, 6.0 reads per million, 19 experiments

gcuaAAAGGAACGAUCGUUGUGAUAUGcguuaauucaccguuacaUAUCACAGUGAUUUUCCUUUAUagcgc
(((((((((((.(((((((((((((((...((((.....)))))))))))))))))))))))))).))))..

Structure

--    -       C               cgu    u 
  gcua AAAGGAA GAUCGUUGUGAUAUG   uaau c
  |||| ||||||| |||||||||||||||   |||| a
  cgaU UUUCCUU UUAGUGACACUAUac   auug c
cg    A       -               ---    c 

Annotation confidence High

Genome context

ref|NC_046680.1|: 16471877-16471948 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dps-mir-5

Mature dps-miR-5-5p

• Accession: MIMAT0001207
• Description: Drosophila pseudoobscura dps-miR-5-5p mature miRNA
• Sequence: 5 - AAAGGAACGAUCGUUGUGAUAUG - 27
• Evidence: not_experimental

Mature dps-miR-5-3p

• Accession: MIMAT0053365
• Description: Drosophila pseudoobscura dps-miR-5-3p mature miRNA
• Sequence: 46 - UAUCACAGUGAUUUUCCUUUAU - 67
• Evidence: not_experimental

References