miRBase entry: dps-mir-9b

Stem-loop dps-mir-9b


Accession
MI0001305
Description
Drosophila pseudoobscura dps-mir-9b precursor miRNA


Sequence

384422 reads, 2503.0 reads per million, 22 experiments
ugcacauuauuugaUCUUUGGUGAUUUUAGCUGUAUGguguauaucaaagauccaUAGAGCUUUAUCACCAAAACCCaaaugguuuuugca
((((.((((((((...(((((((((...((((.(((((..............))))).))))..)))))))))...))))))))...))))

Structure
    --c        aUC         UUU    G     uguaua 
ugca   auuauuug   UUUGGUGAU   AGCU UAUGg      u
||||   ||||||||   |||||||||   |||| |||||       
acgu   ugguaaaC   AAACCACUA   UCGA AUacc      c
    uuu        CCA         -UU    G     uagaaa 


Annotation confidence High
Do you think this miRNA is real?

Genome context
ref|NC_046681.1|: 26309882-26309972 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from dps-mir-9b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dps-miR-9b-5p

Accession MIMAT0001212
Description Drosophila pseudoobscura dps-miR-9b-5p mature miRNA
Sequence 15 - UCUUUGGUGAUUUUAGCUGUAUG - 37
Evidence not_experimental

Mature dps-miR-9b-3p

Accession MIMAT0053369
Description Drosophila pseudoobscura dps-miR-9b-3p mature miRNA
Sequence 56 - UAGAGCUUUAUCACCAAAACCC - 77
Evidence not_experimental

References