Stem-loop dps-mir-13b-1

Accession

MI0001311

Description

Drosophila pseudoobscura dps-mir-13b-1 precursor miRNA

Literature search

1 open access papers mention dps-mir-13b-1
(2 sentences)

Sequence

2940461 reads, 17363.0 reads per million, 22 experiments

ccaugUCGUUAAAAUGUUUGUGACCUUAUGuacucuugaaucaUAUCACAGCCAUUUUGACGAGUuugg
(((..(((((((((((.((((((...((((...........)))))))))).)))))))))))...)))

Structure

   -ug           U      CCU    uacu 
cca   UCGUUAAAAUG UUGUGA   UAUG    c
|||   ||||||||||| ||||||   ||||    u
ggu   AGCAGUUUUAC GACACU   AUac    u
   uUG           C      ---    uaag 

Annotation confidence High

Genome context

ref|NC_046679.1|: 10185457-10185525 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dps-mir-13b-1

Mature dps-miR-13b-1-5p

• Accession: MIMAT0053375
• Description: Drosophila pseudoobscura dps-miR-13b-1-5p mature miRNA
• Sequence: 6 - UCGUUAAAAUGUUUGUGACCUUAUG - 30
• Evidence: not_experimental

Mature dps-miR-13b-3p

• Accession: MIMAT0001218
• Description: Drosophila pseudoobscura dps-miR-13b-3p mature miRNA
• Sequence: 44 - UAUCACAGCCAUUUUGACGAGU - 65
• Evidence: not_experimental

References