Stem-loop dps-mir-79

Accession

MI0001318

Description

Drosophila pseudoobscura dps-mir-79 precursor miRNA

Literature search

1 open access papers mention dps-mir-79
(1 sentences)

Sequence

17729 reads, 118.0 reads per million, 20 experiments

cugcucugcuucuGCUUUGGCGCUUUAGCUGUAUGauagauuuaaaauacuucaUAAAGCUAGAUUACCAAAGCAUuggcucug
.......(((..((((((((...(((((((.(((((...............))))).)))))))...))))))))..)))....

Structure

cugcucu   uc        CGC       G     uagauu 
       gcu  uGCUUUGG   UUUAGCU UAUGa      u
       |||  ||||||||   ||||||| |||||      a
       cgg  ACGAAACC   AGAUCGA AUacu      a
---gucu   uU        AUU       A     ucauaa 

Annotation confidence High

Genome context

ref|NC_046681.1|: 26309687-26309770 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from dps-mir-79

Mature dps-miR-79-5p

• Accession: MIMAT0053382
• Description: Drosophila pseudoobscura dps-miR-79-5p mature miRNA
• Sequence: 14 - GCUUUGGCGCUUUAGCUGUAUG - 35
• Evidence: not_experimental

Mature dps-miR-79-3p

• Accession: MIMAT0001224
• Description: Drosophila pseudoobscura dps-miR-79-3p mature miRNA
• Sequence: 55 - UAAAGCUAGAUUACCAAAGCAU - 76
• Evidence: not_experimental

References