Stem-loop dps-mir-87

Accession

MI0001319

Description

Drosophila pseudoobscura dps-mir-87 precursor miRNA

Literature search

1 open access papers mention dps-mir-87
(1 sentences)

Sequence

49676 reads, 318.0 reads per million, 20 experiments

cauauuucauUCGCGCCUGUAUCUUGCUGAACcguagccauaauggucuuucaucccggUUGAGCAAAAUUUCAGGUGUGugagaaauuuguuaagca
((.(((((.(.((((((((.((.(((((.(((((..((((...)))).........))))).))))).))..)))))))).).))))).)).......

Structure

-------  u     a U        -U  C     G     -------ua    u 
       ca auuuc u CGCGCCUG  AU UUGCU AACcg         gcca  
       || ||||| | ||||||||  || ||||| |||||         |||| a
       gu uaaag g GUGUGGAC  UA AACGA UUggc         uggu  
acgaauu  u     a u        UU  A     G     ccuacuuuc    a 

Annotation confidence Medium

Genome context

ref|NC_046681.1|: 18048222-18048319 [+]

Mature dps-miR-87-5p

• Accession: MIMAT0053383
• Description: Drosophila pseudoobscura dps-miR-87-5p mature miRNA
• Sequence: 11 - UCGCGCCUGUAUCUUGCUGAAC - 32
• Evidence: not_experimental

Mature dps-miR-87-3p

• Accession: MIMAT0001225
• Description: Drosophila pseudoobscura dps-miR-87-3p mature miRNA
• Sequence: 60 - UUGAGCAAAAUUUCAGGUGUG - 80
• Evidence: not_experimental

References