Stem-loop dps-mir-124

Accession

MI0001323

Description

Drosophila pseudoobscura dps-mir-124 precursor miRNA

Literature search

4 open access papers mention dps-mir-124
(4 sentences)

Sequence

367629 reads, 2464.0 reads per million, 22 experiments

ucguuugguacguuuuucuccUGGUAUCCACUGUAGGCCUAUAUGuauuucgaccaUAAGGCACGCGGUGAAUGCCAAGagcggacgaaacucuacua
..((((.((.((((((.....((((((.((((((..((((.((((.........))))))))..)))))).)))))))))))).)).)))).......

Structure

-----uc    g  a      ucucc      C      AG    A    uau 
       guuu gu cguuuu     UGGUAU CACUGU  GCCU UAUG   u
       |||| || ||||||     |||||| ||||||  |||| ||||   u
       caaa ca gcgaGA     ACCGUA GUGGCG  CGGA AUac   c
aucaucu    g  g      -----      A      CA    -    cag 

Annotation confidence High

Genome context

ref|NC_046681.1|: 28800135-28800232 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dps-mir-124

Mature dps-miR-124-5p

• Accession: MIMAT0053387
• Description: Drosophila pseudoobscura dps-miR-124-5p mature miRNA
• Sequence: 22 - UGGUAUCCACUGUAGGCCUAUAUG - 45
• Evidence: not_experimental

Mature dps-miR-124-3p

• Accession: MIMAT0001229
• Description: Drosophila pseudoobscura dps-miR-124-3p mature miRNA
• Sequence: 57 - UAAGGCACGCGGUGAAUGCCAAG - 79
• Evidence: not_experimental

References