Stem-loop dps-mir-125

Accession

MI0001324

Description

Drosophila pseudoobscura dps-mir-125 precursor miRNA

Literature search

3 open access papers mention dps-mir-125
(14 sentences)

Sequence

194699 reads, 1254.0 reads per million, 22 experiments

gacaugugcaaauguuuguauggcugauUCCCUGAGACCCUAACUUGUGAcuuuuaauaccaguuucACAAGUUUUGAUCUCCGGUAUuggacgcaaacuugcugauguu
(((((..((((..((((((....(((((..((.((((.(..(((((((((...............)))))))))..).)))).)).)))))..))))))))))..)))))

Structure

     gu    au      augg     UC  U    C CU         cuuuua 
gacau  gcaa  guuugu    cugau  CC GAGA C  AACUUGUGA      a
|||||  ||||  ||||||    |||||  || |||| |  |||||||||      u
uugua  cguu  caaacg    gguUA  GG CUCU G  UUGAACAcu      a
     gu    --      --ca     -U  C    A UU         uugacc 

Annotation confidence High

Genome context

ref|NC_046681.1|: 21485468-21485577 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dps-mir-125

Mature dps-miR-125-5p

• Accession: MIMAT0001230
• Description: Drosophila pseudoobscura dps-miR-125-5p mature miRNA
• Sequence: 29 - UCCCUGAGACCCUAACUUGUGA - 50
• Evidence: not_experimental

Mature dps-miR-125-3p

• Accession: MIMAT0053388
• Description: Drosophila pseudoobscura dps-miR-125-3p mature miRNA
• Sequence: 68 - ACAAGUUUUGAUCUCCGGUAU - 88
• Evidence: not_experimental

References