Stem-loop dps-mir-277

Accession

MI0001335

Description

Drosophila pseudoobscura dps-mir-277 precursor miRNA

Literature search

2 open access papers mention dps-mir-277
(12 sentences)

Sequence

1257833 reads, 15701.0 reads per million, 22 experiments

uugaagguuuuggguugCGUGUCAGGAGUGCAUUUGCAcugaaacauucugaagcuugUAAAUGCACUAUCUGGUACGACAuuccagaacguacaaucuu
(((.(.((((((((.(((((((((((((((((((((((((............))..)))))))))))).))))))))).)).)))))))).).)))....

Structure

----   a g        u  -         -            --  gaaac 
    uug a guuuuggg ug CGUGUCAGG AGUGCAUUUGCA  cu     a
    ||| | |||||||| || ||||||||| ||||||||||||  ||      
    aac u caagaccu AC GCAUGGUCU UCACGUAAAUgu  ga     u
uucu   a g        u  A         A            uc  agucu 

Annotation confidence High

Genome context

ref|NC_046679.1|: 5316219-5316318 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dps-mir-277

Mature dps-miR-277-5p

• Accession: MIMAT0053399
• Description: Drosophila pseudoobscura dps-miR-277-5p mature miRNA
• Sequence: 18 - CGUGUCAGGAGUGCAUUUGCA - 38
• Evidence: not_experimental

Mature dps-miR-277-3p

• Accession: MIMAT0001241
• Description: Drosophila pseudoobscura dps-miR-277-3p mature miRNA
• Sequence: 59 - UAAAUGCACUAUCUGGUACGACA - 81
• Evidence: not_experimental

References