Stem-loop dps-mir-278

Accession

MI0001336

Description

Drosophila pseudoobscura dps-mir-278 precursor miRNA

Literature search

1 open access papers mention dps-mir-278
(7 sentences)

Sequence

204364 reads, 1612.0 reads per million, 21 experiments

guaaugguacggugcgaCCGGACGAUGGUUCACAACGACCgugucucuuaaacuggUCGGUGGGACUUUCGUCCGUUUguaacgccauuugucagcga
..((((((....(((((.(((((((.(((((.((.((((((.((.......)))))))).))))))).))))))).)))))..)))))).........

Structure

-------gu      acgg     C       U     A  A      u  cu 
         aauggu    ugcga CGGACGA GGUUC CA CGACCg gu  c
         ||||||    ||||| ||||||| ||||| || |||||| ||  u
         uuaccg    augUU GCCUGCU UCAGG GU GCUggu ca  u
agcgacugu      --ca     U       U     -  G      -  aa 

Annotation confidence High

Genome context

ref|NC_046680.1|: 23339855-23339952 [-]

Mature dps-miR-278-5p

• Accession: MIMAT0053400
• Description: Drosophila pseudoobscura dps-miR-278-5p mature miRNA
• Sequence: 18 - CCGGACGAUGGUUCACAACGACC - 40
• Evidence: not_experimental

Mature dps-miR-278-3p

• Accession: MIMAT0001242
• Description: Drosophila pseudoobscura dps-miR-278-3p mature miRNA
• Sequence: 57 - UCGGUGGGACUUUCGUCCGUUU - 78
• Evidence: not_experimental

References