Stem-loop dps-mir-279

Accession

MI0001337

Description

Drosophila pseudoobscura dps-mir-279 precursor miRNA

Literature search

2 open access papers mention dps-mir-279
(3 sentences)

Sequence

668489 reads, 4613.0 reads per million, 22 experiments

ucauacuacuguuuuuaGUGAGUGAGGGUCCAGUGUUUCACAuugauuuucuuaguauuugUGACUAGAUCCACACUCAUUAAuaacgguaguuc
....(((((((((.((((((((((.(((((.((....(((((...(((.....)))...))))))).))))).)))))))))).)))))))))..

Structure

ucau         u          A     C  UGUU     uug   u 
    acuacuguu uuaGUGAGUG GGGUC AG    UCACA   auu u
    ||||||||| |||||||||| ||||| ||    |||||   ||| c
    ugauggcaa AAUUACUCAC CCUAG UC    AGUgu   uga u
--cu         u          A     A  ----     uua   u 

Annotation confidence High

Genome context

ref|NC_046679.1|: 2568504-2568598 [-]

Mature dps-miR-279-5p

• Accession: MIMAT0053401
• Description: Drosophila pseudoobscura dps-miR-279-5p mature miRNA
• Sequence: 18 - GUGAGUGAGGGUCCAGUGUUUCACA - 42
• Evidence: not_experimental

Mature dps-miR-279-3p

• Accession: MIMAT0001243
• Description: Drosophila pseudoobscura dps-miR-279-3p mature miRNA
• Sequence: 62 - UGACUAGAUCCACACUCAUUAA - 83
• Evidence: not_experimental

References