miRBase entry: dps-mir-281-1

Stem-loop dps-mir-281-1


Accession
MI0001339
Description
Drosophila pseudoobscura dps-mir-281-1 precursor miRNA


Sequence

474916 reads, 3270.0 reads per million, 22 experiments
cgaauaggugaauAAAGAGAGCUGUCCGUCGACAgucaacguaccaauuuaauacUGUCAUGGAAUUGCUCUCUUUGUauaauauucg
((((((.....(((((((((((..(((((.((((((.................)))))))))))...)))))))))))....))))))

Structure
      gguga           -UG     C      caacgua 
cgaaua     auAAAGAGAGC   UCCGU GACAgu       c
||||||     |||||||||||   ||||| ||||||       c
gcuuau     UGUUUCUCUCG   AGGUA CUGUca       a
      -aaua           UUA     -      uaauuua 


Annotation confidence High
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Genome context
ref|NC_046680.1|: 4058560-4058647 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dps-mir-281-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dps-miR-281-1-5p

Accession MIMAT0053402
Description Drosophila pseudoobscura dps-miR-281-1-5p mature miRNA
Sequence 14 - AAAGAGAGCUGUCCGUCGACA - 34
Evidence not_experimental

Mature dps-miR-281-3p

Accession MIMAT0001245
Description Drosophila pseudoobscura dps-miR-281-3p mature miRNA
Sequence 56 - UGUCAUGGAAUUGCUCUCUUUGU - 78
Evidence not_experimental

References