Stem-loop dps-mir-304

Accession

MI0001349

Description

Drosophila pseudoobscura dps-mir-304 precursor miRNA

Literature search

1 open access papers mention dps-mir-304
(2 sentences)

Sequence

185269 reads, 1162.0 reads per million, 20 experiments

gcagcauugaaUAAUCUCAAUUUGUAAAUGUGAGcgauuugaggcauuugacacacuCACUUUGCAACUGGAGAUUGCUcgaaacugc
((((..((((.(((((((...(((((((.(((((.(..((((.....))))..).))))))))))))...))))))).))))..))))

Structure

    ca    a       AAU       U     c au    g 
gcag  uuga UAAUCUC   UUGUAAA GUGAG g  uuga g
||||  |||| |||||||   ||||||| ||||| |  |||| c
cguc  agcU GUUAGAG   AACGUUU CACuc c  aguu a
    aa    C       GUC       -     a ac    u 

Annotation confidence High

Genome context

ref|NC_046683.1|: 21427151-21427238 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dps-mir-304

Mature dps-miR-304-5p

• Accession: MIMAT0001254
• Description: Drosophila pseudoobscura dps-miR-304-5p mature miRNA
• Sequence: 12 - UAAUCUCAAUUUGUAAAUGUGAG - 34
• Evidence: not_experimental

Mature dps-miR-304-3p

• Accession: MIMAT0053409
• Description: Drosophila pseudoobscura dps-miR-304-3p mature miRNA
• Sequence: 58 - CACUUUGCAACUGGAGAUUGCU - 79
• Evidence: not_experimental

References