Stem-loop dps-mir-316

Accession

MI0001357

Description

Drosophila pseudoobscura dps-mir-316 precursor miRNA

Sequence

255896 reads, 1623.0 reads per million, 22 experiments

aaauucuagucgauuUGUCUUUUUCCGCUUACUGGCGuuuuauucgaucaacgACAGGAAAGGGAAAAAGGCGUAuuuacuaugaguuu
((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).))))))

Structure

      -    c   u           G   -A   G    uuau 
aaauuc uagu gau UGUCUUUUUCC CUU  CUG CGuu    u
|||||| |||| ||| ||||||||||| |||  ||| ||||     
uuugag auca uuA GCGGAAAAAGG GAA  GAC gcaa    c
      u    u   U           -   AG   A    cuag 

Annotation confidence High

Genome context

ref|NC_046683.1|: 47067181-47067269 [+]

Mature dps-miR-316-5p

• Accession: MIMAT0001262
• Description: Drosophila pseudoobscura dps-miR-316-5p mature miRNA
• Sequence: 16 - UGUCUUUUUCCGCUUACUGGCG - 37
• Evidence: not_experimental

Mature dps-miR-316-3p

• Accession: MIMAT0053416
• Description: Drosophila pseudoobscura dps-miR-316-3p mature miRNA
• Sequence: 54 - ACAGGAAAGGGAAAAAGGCGUA - 75
• Evidence: not_experimental

References