Stem-loop dre-mir-7b

Accession

MI0001360

Description

Danio rerio dre-mir-7b precursor miRNA

Literature search

21 open access papers mention dre-mir-7b
(115 sentences)

Sequence

252662 reads, 731.0 reads per million, 275 experiments

ugaacgcuggcuugcuucugugUGGAAGACUUGUGAUUUUGUUGUUGuuaguuagaugaagugaCAACAAAUCACGGUCUGCCCUAcagcacaggcccagcauc
.....(((((((((...(((((.((.(((((.((((((....((((((((.((.....)).))))))))))))))))))).)).)))))..)))).)))))...

Structure

ugaac     -    cuu     U  A     U      UUGU        g  a 
     gcugg cuug   cugug GG AGACU GUGAUU    UGUUGuua uu g
     ||||| ||||   ||||| || ||||| ||||||    |||||||| || a
     cgacc ggac   gacAU CC UCUGG CACUAA    ACAACagu aa u
--cua     c    -ac     C  G     -      ----        g  g 

Annotation confidence High

Genome context

chr5: 55607744-55607847 [-]

Mature dre-miR-7b-5p

• Accession: MIMAT0001265
• Description: Danio rerio dre-miR-7b-5p mature miRNA
• Sequence: 23 - UGGAAGACUUGUGAUUUUGUUGUUG - 47
• Evidence: experimental ; PCR [1]

Mature dre-miR-7b-3p

• Accession: MIMAT0052732
• Description: Danio rerio dre-miR-7b-3p mature miRNA
• Sequence: 65 - CAACAAAUCACGGUCUGCCCUA - 86
• Evidence: experimental ; PCR [1]

References

1. PubMed ID: 12624257
   Vertebrate microRNA genes
   "Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP"
   "Science (2003) 299:1540