Stem-loop dre-mir-7a-1

Accession

MI0001361

Description

Danio rerio dre-mir-7a-1 precursor miRNA

Literature search

13 open access papers mention dre-mir-7a-1
(99 sentences)

Sequence

950680 reads, 2740.0 reads per million, 254 experiments

ugUGGAAGACUAGUGAUUUUGUUGUuguuucuucugcuuucugaCAACAAGUCACAGUCUACCUCagcgagcgggcccu
((.((.(((((.(((((((.((((((................)))))))))))))))))).)).))((......))...

Structure

-------------  U  A     A       U      guuucuu 
             ug GG AGACU GUGAUUU GUUGUu       c
             || || ||||| ||||||| ||||||        
             aC CC UCUGA CACUGAA CAACag       u
ucccgggcgagcg  U  A     -       -      ucuuucg 

Annotation confidence High

Genome context

chr25: 12472467-12472545 [+]

Mature dre-miR-7a-5p

• Accession: MIMAT0001266
• Description: Danio rerio dre-miR-7a-5p mature miRNA
• Sequence: 3 - UGGAAGACUAGUGAUUUUGUUGU - 25
• Evidence: experimental ; cloned [1]

Mature dre-miR-7a-1-3p

• Accession: MIMAT0052733
• Description: Danio rerio dre-miR-7a-1-3p mature miRNA
• Sequence: 45 - CAACAAGUCACAGUCUACCUC - 65
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 12624257
   Vertebrate microRNA genes
   "Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP"
   "Science (2003) 299:1540