Stem-loop dre-mir-223

Accession

MI0001389

Description

Danio rerio dre-mir-223 precursor miRNA mir-223

Gene
family

RF00664; mir-223

Literature search

71 open access papers mention dre-mir-223
(367 sentences)

Sequence

203375 reads, 624.0 reads per million, 285 experiments

cucuccuccugaucuagacucuucucuuAGAGUAUUUGACAGACUGUGGUugacacucgaucuaaaggggUGUCAGUUUGUCAAAUACCCCaagagagg
....................((((((((.(.((((((((((((((......(((((((.........))))))))))))))))))))).).))))))))

Structure

cucuccuccugaucuagacu        A A              GUGGUu       gau 
                    cuucucuu G GUAUUUGACAGACU      gacacuc   c
                    |||||||| | ||||||||||||||      |||||||   u
                    ggagagaa C CAUAAACUGUUUGA      CUGUggg   a
--------------------        C C              ------       gaa 

Annotation confidence High

Genome context

chr5: 22234407-22234505 [-]

Mature dre-miR-223-5p

• Accession: MIMAT0060860
• Description: Danio rerio dre-miR-223-5p mature miRNA
• Sequence: 29 - AGAGUAUUUGACAGACUGUGGU - 50
• Evidence: experimental ; PCR [1]

Mature dre-miR-223-3p

• Accession: MIMAT0001290
• Description: Danio rerio dre-miR-223-3p mature miRNA
• Sequence: 71 - UGUCAGUUUGUCAAAUACCCC - 91
• Evidence: experimental ; PCR [1]

References

1. PubMed ID: 12624257
   Vertebrate microRNA genes
   "Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP"
   "Science (2003) 299:1540