Stem-loop sbi-MIR166e

Accession

MI0001550

Description

Sorghum bicolor sbi-MIR166e precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

5 open access papers mention sbi-MIR166e
(11 sentences)

Sequence

caaguugaagguuagguuaaugggguuguugucugguucaaggucgccacagcagacaaagcccauuuugcuuagcaugcagcauggguuuaucucuauugaugaucgaucUCGGACCAGGCUUCAAUCCCUuuaacuagcaucugcauau
...((.((..(((((.((((.(((((((..(((((((((.((((((.(((((.(((..((((((((.((((.......)))).))))))))...))).))).))..)))))).)))))))))..))))))).))))))))).)).))....

Structure

-caa  u  ag     g    u       uu         a      -c  -   c   -ca        u    uu 
    gu ga  guuag uuaa gggguug  gucugguuc aggucg  ca cag aga   aagcccau uugc  a
    || ||  ||||| |||| |||||||  ||||||||| ||||||  || ||| |||   |||||||| ||||  g
    cg cu  cgauc aauu CCCUAAC  CGGACCAGG Ucuagc  gu guu ucu   uuugggua gacg  c
uaua  u  -a     -    U       UU         C      ua  a   a   cua        c    ua 

Annotation confidence Not enough data

Genome context

chr2: 61405284-61405434 [+]

Mature sbi-miR166e

• Accession: MIMAT0001446
• Description: Sorghum bicolor sbi-miR166e mature miRNA
• Sequence: 112 - UCGGACCAGGCUUCAAUCCCU - 132
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13