Stem-loop ame-mir-282

Accession

MI0001588

Description

Apis mellifera ame-mir-282 precursor miRNA mir-282

Gene
family

RF00724; mir-282

Literature search

2 open access papers mention ame-mir-282
(2 sentences)

Sequence

29573 reads, 424.0 reads per million, 24 experiments

ggacagaguaacuugauuuagccucuccuaggcuuugucuguauauaaagaacggagACAUAGCCUAGAAUAGGUUAGGucagggcucguuc
((((.((((..(((((((((((((...(((((((.(((((...............))))).)))))))...)))))))))))))))))))))

Structure

    a    aa             cuc       u     guauau 
ggac gagu  cuugauuuagccu   cuaggcu ugucu      a
|||| ||||  |||||||||||||   ||||||| |||||      a
cuug cucg  ggacuGGAUUGGA   GAUCCGA ACAga      a
    -    --             UAA       U     ggcaag 

Annotation confidence Not enough data

Genome context

CM000065.5: 8474136-8474227 [-]

Mature ame-miR-282-5p

• Accession: MIMAT0001484
• Description: Apis mellifera ame-miR-282-5p mature miRNA
• Sequence: 58 - ACAUAGCCUAGAAUAGGUUAGG - 79
• Evidence: experimental ; array [1], Illumina [2-3]

References

1. PubMed ID: 17543122
   Computational and transcriptional evidence for microRNAs in the honey bee genome
   Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
   Genome Biol (2007) 8:R97


2. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670


3. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226