Stem-loop aga-mir-100

Accession

MI0001603

Description

Anopheles gambiae aga-mir-100 precursor miRNA

Literature search

6 open access papers mention aga-mir-100
(7 sentences)

Sequence

111696 reads, 6729.0 reads per million, 24 experiments

gccccgucuguggaAACCCGUAGAUCCGAACUUGUGcugcacuguacaacuggacaCAAGAACGGAUAUAUGGGAUUCUgucgacgguuggc
((((((((..(((((.((((((.(((((..((((((.(.((.(.....).)).)))))))..))))).)))))).)))))..)))))..)))

Structure

   --     ug     A      G     AA      c g  c g 
gcc  ccguc  uggaA CCCGUA AUCCG  CUUGUG u ca u u
|||  |||||  ||||| |||||| |||||  |||||| | || | a
cgg  ggcag  gUCUU GGGUAU UAGGC  GAACac a gu a c
   uu     cu     A      A     AA      - g  c a 

Annotation confidence High

Genome context

ref|NC_064602.1|: 10200498-10200589 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from aga-mir-100

Mature aga-miR-100-5p

• Accession: MIMAT0001498
• Description: Anopheles gambiae aga-miR-100-5p mature miRNA
• Sequence: 15 - AACCCGUAGAUCCGAACUUGUG - 36
• Evidence: not_experimental

Mature aga-miR-100-3p

• Accession: MIMAT0052993
• Description: Anopheles gambiae aga-miR-100-3p mature miRNA
• Sequence: 57 - CAAGAACGGAUAUAUGGGAUUCU - 79
• Evidence: not_experimental

References