Stem-loop aga-mir-279

Accession

MI0001617

Description

Anopheles gambiae aga-mir-279 precursor miRNA

Literature search

2 open access papers mention aga-mir-279
(3 sentences)

Sequence

33384 reads, 2201.0 reads per million, 24 experiments

uuccuaucaguguaAAUGGGUGUGAAUCUAGUGAUUUCacaugaauuuucgauugUGACUAGAUCCACACUCAUUAAuguuguuuggaa
.(((...((((((.((((((((((.((((((.....((((((((....)))..))))))))))).)))))))))).))))))...))).

Structure

u   uau      a          A      UGAUU     --   a 
 ucc   cagugu AAUGGGUGUG AUCUAG     UCaca  uga u
 |||   |||||| |||||||||| ||||||     |||||  |||  
 agg   guuguA UUACUCACAC UAGAUC     AGUgu  gcu u
a   uuu      A          C      -----     ua   u 

Annotation confidence High

Genome context

ref|NC_064601.1|: 53947571-53947659 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aga-mir-279

Mature aga-miR-279-5p

• Accession: MIMAT0053006
• Description: Anopheles gambiae aga-miR-279-5p mature miRNA
• Sequence: 15 - AAUGGGUGUGAAUCUAGUGAUUUC - 38
• Evidence: not_experimental

Mature aga-miR-279-3p

• Accession: MIMAT0001512
• Description: Anopheles gambiae aga-miR-279-3p mature miRNA
• Sequence: 56 - UGACUAGAUCCACACUCAUUAA - 77
• Evidence: not_experimental

References