Stem-loop aga-mir-2-1

Accession

MI0001621

Description

Anopheles gambiae aga-mir-2-1 precursor miRNA

Literature search

2 open access papers mention aga-mir-2-1
(12 sentences)

Sequence

42001 reads, 2729.0 reads per million, 24 experiments

gcauguccuguCUCUCAAAGUGGCUGUGAAAUGgugcacuuucgauccgauaucucaUAUCACAGCCAGCUUUGAUGAGCuaggccg
....(.((((.((((((((((((((((((.((((.......(((...)))....)))).))))))))).)))))).))).)))).).

Structure

gcau u    u   -      -         A    ugcacuu   a 
    g ccug CUC UCAAAG UGGCUGUGA AUGg       ucg  
    | |||| ||| |||||| ||||||||| ||||       ||| u
    c ggau GAG AGUUUC ACCGACACU Uacu       agc  
---g c    C   U      G         A    ---cuau   c 

Annotation confidence High

Genome context

ref|NC_064601.1|: 106556276-106556362 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from aga-mir-2-1

Mature aga-miR-2-1-5p

• Accession: MIMAT0053010
• Description: Anopheles gambiae aga-miR-2-1-5p mature miRNA
• Sequence: 12 - CUCUCAAAGUGGCUGUGAAAUG - 33
• Evidence: not_experimental

Mature aga-miR-2-3p

• Accession: MIMAT0009202
• Description: Anopheles gambiae aga-miR-2-3p mature miRNA
• Sequence: 58 - UAUCACAGCCAGCUUUGAUGAGC - 80
• Evidence: not_experimental

References