Stem-loop aga-mir-2-2

Accession

MI0001622

Description

Anopheles gambiae aga-mir-2-2 precursor miRNA

Literature search

2 open access papers mention aga-mir-2-2
(12 sentences)

Sequence

37188 reads, 2484.0 reads per million, 24 experiments

uauugggugccaugcauugUCAUCAAACUUGGUUGUUGUAgcuugcuuugauaguugcUAUCACAGCCAGCUUUGAUGAGCaaugcgucacuuaccua
...((((((..((((((((((((((((.((((((((.(((((..(((.....))).))))).)))))))).)))))))).))))))))))))))....

Structure

-uau      cc        -        C        U     uu   u 
    ugggug  augcauug UCAUCAAA UUGGUUGU GUAgc  gcu u
    ||||||  |||||||| |||||||| |||||||| |||||  ||| g
    auucac  ugcguaaC AGUAGUUU GACCGACA UAUcg  uga a
aucc      --        G        C        C     -u   u 

Annotation confidence High

Genome context

ref|NC_064601.1|: 106557858-106557955 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from aga-mir-2-2

Mature aga-miR-2-2-5p

• Accession: MIMAT0053011
• Description: Anopheles gambiae aga-miR-2-2-5p mature miRNA
• Sequence: 20 - UCAUCAAACUUGGUUGUUGUA - 40
• Evidence: not_experimental

Mature aga-miR-2-3p

• Accession: MIMAT0009202
• Description: Anopheles gambiae aga-miR-2-3p mature miRNA
• Sequence: 59 - UAUCACAGCCAGCUUUGAUGAGC - 81
• Evidence: not_experimental

References