Stem-loop aga-mir-79

Accession

MI0001629

Description

Anopheles gambiae aga-mir-79 precursor miRNA

Literature search

1 open access papers mention aga-mir-79
(3 sentences)

Sequence

396 reads, 27.0 reads per million, 24 experiments

gugcccuuuuguccgcGCUUUGGCGCUUUAGCUGUAUGAuagaauuugaacuauuucaUAAAGCUAGAUUACCAAAGCAUagacgaauugggac
((.((..((((((.(.(((((((...(((((((.((((((((........)))..))))).)))))))...))))))).).))))))..)).))

Structure

  g  cu      c c       CGC       G     --   aau 
gu cc  uuuguc g GCUUUGG   UUUAGCU UAUGA  uag   u
|| ||  |||||| | |||||||   ||||||| |||||  |||    
ca gg  aagcag U CGAAACC   AGAUCGA AUacu  auc   u
  g  uu      a A       AUU       A     uu   aag 

Annotation confidence High

Genome context

ref|NC_064602.1|: 5875184-5875275 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from aga-mir-79

Mature aga-miR-79-5p

• Accession: MIMAT0053018
• Description: Anopheles gambiae aga-miR-79-5p mature miRNA
• Sequence: 17 - GCUUUGGCGCUUUAGCUGUAUGA - 39
• Evidence: not_experimental

Mature aga-miR-79-3p

• Accession: MIMAT0001524
• Description: Anopheles gambiae aga-miR-79-3p mature miRNA
• Sequence: 59 - UAAAGCUAGAUUACCAAAGCAU - 80
• Evidence: not_experimental

References