Stem-loop aga-mir-9b

Accession

MI0001634

Description

Anopheles gambiae aga-mir-9b precursor miRNA

Literature search

3 open access papers mention aga-mir-9b
(8 sentences)

Sequence

53640 reads, 5249.0 reads per million, 24 experiments

ugccacuuauugggACUUUGGUGAUUUUAGCUGUAUGuugaaugcauuccuaaccacaUAUAGCUUUAUCACCAAAAACCuaaugugugugua
((((((.(((((((..(((((((((...((((((((((.(.............).))))))))))..)))))))))..))))))).))).)))

Structure

   -   u       AC         UUU          u aaugc 
ugc cac uauuggg  UUUGGUGAU   AGCUGUAUGu g     a
||| ||| |||||||  |||||||||   |||||||||| |     u
aug gug guaauCC  AAACCACUA   UCGAUAUaca c     u
   u   u       AA         -UU          c aaucc 

Annotation confidence High

Genome context

ref|NC_064602.1|: 5874672-5874764 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from aga-mir-9b

Mature aga-miR-9b-5p

• Accession: MIMAT0001529
• Description: Anopheles gambiae aga-miR-9b-5p mature miRNA
• Sequence: 15 - ACUUUGGUGAUUUUAGCUGUAUG - 37
• Evidence: not_experimental

Mature aga-miR-9b-3p

• Accession: MIMAT0053023
• Description: Anopheles gambiae aga-miR-9b-3p mature miRNA
• Sequence: 59 - UAUAGCUUUAUCACCAAAAACC - 80
• Evidence: not_experimental

References