Stem-loop aga-mir-9c

Accession

MI0001635

Description

Anopheles gambiae aga-mir-9c precursor miRNA

Literature search

3 open access papers mention aga-mir-9c
(4 sentences)

Sequence

281537 reads, 27398.0 reads per million, 24 experiments

uuuccggcuguaUCUUUGGUAUUCUAGCUGUAGAauguuguuuucauuguaauaucucUAAAGCUUUAGUACCAGAGGUCcaacugggaa
.((((((.((.((((((((((((..((((.((((((((((.........)))))).)))).))))..)))))))))))).)).)))))).

Structure

u      c  u            CU    G    -      uuu 
 uuccgg ug aUCUUUGGUAUU  AGCU UAGA auguug   u
 |||||| || ||||||||||||  |||| |||| ||||||   c
 aggguc ac UGGAGACCAUGA  UCGA AUcu uauaau   a
a      a  C            UU    A    c      guu 

Annotation confidence High

Genome context

ref|NC_064602.1|: 5878042-5878131 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from aga-mir-9c

Mature aga-miR-9c-5p

• Accession: MIMAT0001530
• Description: Anopheles gambiae aga-miR-9c-5p mature miRNA
• Sequence: 13 - UCUUUGGUAUUCUAGCUGUAGA - 34
• Evidence: not_experimental

Mature aga-miR-9c-3p

• Accession: MIMAT0053024
• Description: Anopheles gambiae aga-miR-9c-3p mature miRNA
• Sequence: 59 - UAAAGCUUUAGUACCAGAGGUC - 80
• Evidence: not_experimental

References