Stem-loop sbi-MIR399h

Accession

MI0001849

Description

Sorghum bicolor sbi-MIR399h precursor miRNA

Literature search

3 open access papers mention sbi-MIR399h
(5 sentences)

Sequence

aguguucaggguaagaaucacagugcgguucuccucuggcauggaggccaacauagcaggcauuggagaaugcacagcgcuaucgccaucccUGCCAAAGGAGAAUUGCCCUGccauucgguauaacccugg
......((((((..((((..(((.(((((((((((.(((((.((((((....(((((.((((((....))))).)...))))).))).))).))))).))))))))))).)))..))))......)))))).

Structure

aguguu      ----aa    ca   u           c     u   -   caac     --a -     g 
      cagggu      gaau  cag gcgguucuccu uggca gga ggc    auagc   g gcauu g
      ||||||      ||||  ||| ||||||||||| ||||| ||| |||    |||||   | |||||  
      guccca      cuua  GUC CGUUAAGAGGA ACCGU ccu ccg    uaucg   c cguaa a
-----g      auaugg    cc   C           A     c   a   ---c     cga a     g 

Annotation confidence Not enough data

Genome context

chr10: 48189611-48189742 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from sbi-MIR399h

Mature sbi-miR399h

• Accession: MIMAT0001751
• Description: Sorghum bicolor sbi-miR399h mature miRNA
• Sequence: 93 - UGCCAAAGGAGAAUUGCCCUG - 113
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13