Stem-loop sbi-MIR395f

Accession

MI0001855

Description

Sorghum bicolor sbi-MIR395f precursor miRNA

Literature search

5 open access papers mention sbi-MIR395f
(34 sentences)

Sequence

acaauguuugguguuaccacgaguucccuucaagcacuucaugaggcaccauuaaauaacucuauuuaagauuagguguaauAUGAAGUGUUUGGGGGAACUCuuggugauacucaacaucg
...(((((.((((((((((.(((((((((.((((((((((((...(((((.(((((((....))))))).....)))))...))))))))))))))))))))).)))))))))).)))))..

Structure

aca     u          c         u            gag     ----a       a 
   auguu gguguuacca gaguucccu caagcacuucau   gcacc     uuaaaua c
   ||||| |||||||||| ||||||||| ||||||||||||   |||||     |||||||  
   uacaa ucauaguggu CUCAAGGGG GUUUGUGAAGUA   ugugg     aauuuau u
-gc     c          u         -            uaa     auuag       c 

Annotation confidence Not enough data

Genome context

chr6: 57228009-57228130 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from sbi-MIR395f

Mature sbi-miR395f

• Accession: MIMAT0001757
• Description: Sorghum bicolor sbi-miR395f mature miRNA
• Sequence: 83 - AUGAAGUGUUUGGGGGAACUC - 103
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13