Stem-loop dre-mir-26a-3

Accession

MI0001926

Description

Danio rerio dre-mir-26a-3 precursor miRNA mir-26

Gene
family

RF00244; mir-26

Literature search

9 open access papers mention dre-mir-26a-3
(113 sentences)

Sequence

64857100 reads, 42776.0 reads per million, 303 experiments

cuaagcugauacugagucaguguguggcugcaaccuggUUCAAGUAAUCCAGGAUAGGCUUuguggacuaggguuggCCUGUUCUUGGUUACUUGCACUggguugcagcuacuaaacaacuaagaagaucagaagag
.....(((((.((.......(((((((((((((((((((.(((((((((.((((((((((...............)))))))))).))))))))).))))))))))))))))...))).......))))))).....

Structure

cuaag     a  gagucag   ---                U         C          Uugugg 
     cugau cu       ugu   guggcugcaaccuggU CAAGUAAUC AGGAUAGGCU      a
     ||||| ||       |||   |||||||||||||||| ||||||||| ||||||||||      c
     gacua ga       aca   caucgacguugggUCA GUUCAUUGG UCUUGUCCgg      u
gagaa     -  agaauca   aau                C         U          uuggga 

Annotation confidence High

Genome context

chr24: 20470954-20471090 [-]

Mature dre-miR-26a-3-5p

• Accession: MIMAT0001794
• Description: Danio rerio dre-miR-26a-3-5p mature miRNA
• Sequence: 39 - UUCAAGUAAUCCAGGAUAGGCUU - 61
• Evidence: experimental ; cloned [1]

Mature dre-miR-26a-3-3p

• Accession: MIMAT0052759
• Description: Danio rerio dre-miR-26a-3-3p mature miRNA
• Sequence: 78 - CCUGUUCUUGGUUACUUGCACU - 99
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293