Accession
MI0002037
Description
Danio rerio
dre-mir-200a precursor miRNA
Gene family
MIPF0000019;
mir-8
Literature search
19 open access papers mention dre-mir-200a
(237 sentences)
(237 sentences)
Sequence
50315
reads,
2693
reads per million, 11 experiments
ggcacuuagcagcCAUCUUACCGGACAGUGCUGGAcuguauaacuguuuucUAACACUGUCUGGUAACGAUGUuuguugggugacc
((((((((((((.(((((((((((((((((.((((..............)))).))))))))))))).)))).)))))))))).))
((((((((((((.(((((((((((((((((.((((..............)))).))))))))))))).)))).)))))))))).))
Structure
- c - C cuguau gg cacuuagcag CAUC UUACCGGACAGUG UGGA a || |||||||||| |||| ||||||||||||| |||| cc guggguuguu GUAG AAUGGUCUGUCAC AUcu a a U C A uuuguc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr23: 24072160-24072245 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from dre-mir-200a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-200a-3p
| Accession | MIMAT0001861 |
| Description | Danio rerio dre-miR-200a-3p mature miRNA |
| Sequence | 52 - UAACACUGUCUGGUAACGAUGU - 73 |
| Evidence |
experimental
cloned [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-200a-5p
| Accession | MIMAT0031984 |
| Description | Danio rerio dre-miR-200a-5p mature miRNA |
| Sequence | 14 - CAUCUUACCGGACAGUGCUGGA - 35 |
| Evidence | not_experimental |
| Database links |
|
References
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