Stem-loop ptc-MIR474b

Accession

MI0002359

Description

Populus trichocarpa ptc-MIR474b precursor miRNA

Literature search

1 open access papers mention ptc-MIR474b
(1 sentences)

Sequence

uuCAAAAGUUGUUGGGUUUGGCUGGGcagccagauccagugcuauuggguccuguuagacaacgcuauuuggucuugucaagcuagauccaacauuacuuuuugacu
.((((((((((((((((((((((.(((((...((((((((...))))))))))))).(((((.(((....))).))))).))))))))))))))..)).))))))..

Structure

-u      -  --              -----------------------G     cca        g 
  uCAAAA GU  UGUUGGGUUUGGCU                        GGcag   gauccagu  
  |||||| ||  ||||||||||||||                        |||||   |||||||| c
  aguuuu ca  acaaccuagaucga                        uuguc   cuggguua  
uc      u  uu              acuguucugguuuaucgcaacaga     ---        u 

Annotation confidence Not enough data

Genome context

CM000337.2: 9003159-9003265 [+]

Mature ptc-miR474b

• Accession: MIMAT0002065
• Description: Populus trichocarpa ptc-miR474b mature miRNA
• Sequence: 3 - CAAAAGUUGUUGGGUUUGGCUGGG - 26
• Evidence: not_experimental

References

1. PubMed ID: 15994906
   Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis
   "Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL"
   "Plant Cell (2005) 17:2186-2203