miRBase entry: mml-mir-153-1

Stem-loop mml-mir-153-1


Accession
MI0002563
Description
Macaca mulatta mml-mir-153-1 precursor miRNA mir-153
Gene
family?
RF00650; mir-153


Sequence

6426 reads, 59 reads per million, 9 experiments
cucacagcugccagugUCAUUUUUGUGAUCUGCAGCUaguauucucacuccagUUGCAUAGUCACAAAAGUGAucauuggcagguguggc
.(((((.((((((((((((((((((((((.((((((((((......)))..)))))))..))))))))))))).))))))))).))))).

Structure
c     g         -             -C       --   au 
 ucaca cugccagug UCAUUUUUGUGAU  UGCAGCU  agu  u
 ||||| ||||||||| |||||||||||||  |||||||  |||   
 ggugu gacgguuac AGUGAAAACACUG  ACGUUga  uca  c
c     g         u             AU       cc   cu 


Annotation confidence High
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Genome context
chr12: 101425493-101425582 [-]

Database links

Mature mml-miR-153-3p

Accession MIMAT0002271
Description Macaca mulatta mml-miR-153-3p mature miRNA
Sequence 54 - UUGCAUAGUCACAAAAGUGA - 73
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-153-1-5p

Accession MIMAT0026569
Description Macaca mulatta mml-miR-153-1-5p mature miRNA
Sequence 17 - UCAUUUUUGUGAUCUGCAGCU - 37
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45