miRBase entry: mml-mir-19b-2

Stem-loop mml-mir-19b-2


Accession
MI0003108
Description
Macaca mulatta mml-mir-19b-2 precursor miRNA mir-19
Gene
family?
RF00245; mir-19

Literature search
3 open access papers mention mml-mir-19b-2
(4 sentences)

Sequence

3853 reads, 49 reads per million, 9 experiments
acauugcuacuuacaauuaguuuugcagguuugcauuucagcguauauauguauauguggcUGUGCAAAUCCAUGCAAAACUGAuugugauaaugu
((((((....((((((((((((((((((((((((((....(((((((....)))))))....))))))).)).)))))))))))))))))))))))

Structure
      cuac                 -  -       uuca       u 
acauug    uuacaauuaguuuugca gg uuugcau    gcguaua a
||||||    ||||||||||||||||| || |||||||    |||||||  
uguaau    aguguuAGUCAAAACGU CC AAACGUG    uguauau u
      ----                 A  U       Ucgg       g 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chrX: 128132026-128132121 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from mml-mir-19b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-19b

Accession MIMAT0002705
Description Macaca mulatta mml-miR-19b mature miRNA
Sequence 62 - UGUGCAAAUCCAUGCAAAACUGA - 84
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24