miRBase entry: hsa-mir-517b

Stem-loop hsa-mir-517b


Accession
MI0003165
Symbol
HGNC: MIR517B
Description
Homo sapiens hsa-mir-517b precursor miRNA mir-515
Gene
family?
RF00639; mir-515

Literature search
20 open access papers mention hsa-mir-517b
(63 sentences)

Sequence

221 reads, 4 reads per million, 25 experiments
gugacCCUCUAGAUGGAAGCACUGUCUguugucuaagaaaagAUCGUGCAUCCCUUUAGAGUGUuac
(((((.(((((((.(((.((((.((((.............)))).)))).))).))))))).)))))

Structure
     C       U   A    U    guugu 
gugac CUCUAGA GGA GCAC GUCU     c
||||| ||||||| ||| |||| ||||     u
cauUG GAGAUUU CCU CGUG UAga     a
     U       C   A    C    aaaga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr19: 53721076-53721142 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from hsa-mir-517b
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-517b is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-517-5p

Accession MIMAT0002851
Description Homo sapiens hsa-miR-517-5p mature miRNA
Sequence 6 - CCUCUAGAUGGAAGCACUGUCU - 27
Evidence experimental
array-cloned [1]

Mature hsa-miR-517b-3p

Accession MIMAT0002857
Description Homo sapiens hsa-miR-517b-3p mature miRNA
Sequence 43 - AUCGUGCAUCCCUUUAGAGUGU - 64
Evidence experimental
array-cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15965474
    Identification of hundreds of conserved and nonconserved human microRNAs
    "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
    "Nat Genet (2005) 37:766-770