Stem-loop fru-let-7e

Accession

MI0003213

Description

Fugu rubripes fru-let-7e precursor miRNA

Sequence

gcuguccuugggguUGAGGUAGUAGAUUGAAUAGUUgugggguugugugaccucuuagugagauaacuauacaaucuacugucuuuccuaaggagacagc
(((((((((((((..((((((((((((((.((((((((((((((....))))))........)))))))).)))))))))))))))))))))))..))))

Structure

    --         uU              A        --------      g 
gcug  uccuugggg  GAGGUAGUAGAUUG AUAGUUgu        gggguu u
||||  |||||||||  |||||||||||||| ||||||||        ||||||  
cgac  aggaauccu  uucugucaucuaac uaucaaua        cuccag g
    ag         --              a        gagugauu      u 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602537.1: 8251435-8251534 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-let-7e

Mature fru-let-7e

• Accession: MIMAT0002898
• Description: Fugu rubripes fru-let-7e mature miRNA
• Sequence: 15 - UGAGGUAGUAGAUUGAAUAGUU - 36
• Evidence: not_experimental

References