Accession
MI0003237
Description
Fugu rubripes
fru-mir-19b precursor miRNA
Sequence
26604
reads,
309.0
reads per million, 12 experiments
gucAGUUUUGCUGGUUUGCAUCCAGcuuuguuaccgcgcUGUGCAAAUCCAUGCAAAACUGAc
((((((((((((((((((((..((((...........)))))))))).))).)))))))))))
((((((((((((((((((((..((((...........)))))))))).))).)))))))))))
Structure
- - UC uuug
gucAGUUUUGC UGG UUUGCA CAGc u
||||||||||| ||| |||||| |||| u
cAGUCAAAACG ACC AAACGU GUcg a
U U -- cgcc
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
ref|NC_042297.1|: 16855970-16856032 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from fru-mir-19b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fru-miR-19b-5p
| Accession | MIMAT0052829 |
| Description | Fugu rubripes fru-miR-19b-5p mature miRNA |
| Sequence | 4 - AGUUUUGCUGGUUUGCAUCCAG - 25 |
| Evidence | not_experimental |
Mature fru-miR-19b-3p
| Accession | MIMAT0002922 |
| Description | Fugu rubripes fru-miR-19b-3p mature miRNA |
| Sequence | 40 - UGUGCAAAUCCAUGCAAAACUGA - 62 |
| Evidence | not_experimental |
References
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