Accession
MI0003246
Description
Fugu rubripes
fru-mir-187 precursor miRNA
Sequence
659205
reads,
6294.0
reads per million, 12 experiments
guggccauuuggccgggccaggGGCUGCAACACAGGACAUGGGUcaugccucugcccaccgcUCGUGUCUUGUGUUGCAGCCaguggagcug
..((((....))))(..(((..((((((((((((((((((((((..((........))..))))))))))))))))))))))..)))..)..
..((((....))))(..(((..((((((((((((((((((((((..((........))..))))))))))))))))))))))..)))..)..
Structure
guggccauuuggcc gg gg ca ccu
g cca GGCUGCAACACAGGACAUGGGU ug c
| ||| |||||||||||||||||||||| ||
c ggu CCGACGUUGUGUUCUGUGCUcg ac u
------------gu ga ga cc ccg
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
ref|NC_042296.1|: 1600216-1600307 [-]
Database links
Mature fru-miR-187-5p
| Accession | MIMAT0052835 |
| Description | Fugu rubripes fru-miR-187-5p mature miRNA |
| Sequence | 23 - GGCUGCAACACAGGACAUGGGU - 44 |
| Evidence | not_experimental |
Mature fru-miR-187-3p
| Accession | MIMAT0002930 |
| Description | Fugu rubripes fru-miR-187-3p mature miRNA |
| Sequence | 63 - UCGUGUCUUGUGUUGCAGCC - 82 |
| Evidence | not_experimental |
References
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