Stem-loop fru-mir-194

Accession

MI0003259

Description

Fugu rubripes fru-mir-194 precursor miRNA

Sequence

cgcuggaUGUAACAGCAACUCCAUGUGGaagcuguaugugaguuccaguggaagugcuguuaccugcagaga
..(((.(.(((((((((..(((((.(((((.((.......))))))))))))..))))))))).).)))...

Structure

-cg   g U         AC     G     g  gu 
   cug a GUAACAGCA  UCCAU UGGaa cu  a
   ||| | |||||||||  ||||| ||||| ||  u
   gac u cauugucgu  aggug accuu ga  g
aga   g c         ga     -     -  gu 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602549.1: 7517908-7517979 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-194

Mature fru-miR-194

• Accession: MIMAT0002943
• Description: Fugu rubripes fru-miR-194 mature miRNA
• Sequence: 8 - UGUAACAGCAACUCCAUGUGG - 28
• Evidence: not_experimental

References