Stem-loop fru-mir-216b

Accession

MI0003293

Description

Fugu rubripes fru-mir-216b precursor miRNA

Sequence

ugacuguuUAAUCUCUGCAGGCAACUGUGAugguguuuuauauucucacaaucaccuggagagauucugcaguuuau
.((((((..(((((((.((((....(((((.(((((...))))).)))))....)))).)))))))..))))))...

Structure

--u      uU       G    CAAC     u     u 
   gacugu  AAUCUCU CAGG    UGUGA ggugu  
   ||||||  ||||||| ||||    ||||| ||||| u
   uugacg  uuagaga gucc    acacu uuaua  
uau      uc       g    acua     c     u 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602538.1: 10291881-10291957 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-216b

Mature fru-miR-216b

• Accession: MIMAT0002975
• Description: Fugu rubripes fru-miR-216b mature miRNA
• Sequence: 9 - UAAUCUCUGCAGGCAACUGUGA - 30
• Evidence: not_experimental

References