Stem-loop fru-let-7a-2

Accession

MI0003313

Description

Fugu rubripes fru-let-7a-2 precursor miRNA

Literature search

1 open access papers mention fru-let-7a-2
(3 sentences)

Sequence

3766408 reads, 40026.0 reads per million, 12 experiments

gggUGAGGUAGUAGGUUGUAUAGUUuuaggguuauacccuuccugucagauaaCUAUACAACUUACUGUCUUUCCU
(((.(((((((((((((((((((((..(((((...)))))...........))))))))))))))))))))).)))

Structure

   U                     ---------uu     u 
ggg GAGGUAGUAGGUUGUAUAGUU           agggu  
||| |||||||||||||||||||||           ||||| a
UCC UUCUGUCAUUCAACAUAUCaa           uccca  
   U                     uagacuguccu     u 

Annotation confidence Medium

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042293.1|: 11639699-11639774 [+]

Mature fru-let-7a-5p

• Accession: MIMAT0002928
• Description: Fugu rubripes fru-let-7a-5p mature miRNA
• Sequence: 4 - UGAGGUAGUAGGUUGUAUAGUU - 25
• Evidence: not_experimental

Mature fru-let-7a-2-3p

• Accession: MIMAT0052834
• Description: Fugu rubripes fru-let-7a-2-3p mature miRNA
• Sequence: 54 - CUAUACAACUUACUGUCUUUCCU - 76
• Evidence: not_experimental

References