Stem-loop fru-mir-218a-1

Accession

MI0003317

Description

Fugu rubripes fru-mir-218a-1 precursor miRNA

Sequence

cggcugucucUUGUGCUUGAUCUAACCAUGUGgccccgccuauugugacaucacaugguuccgucaagcgccagggaccgcug
((((.((((((.(((((((((..((((((((((...(((.....)))...))))))))))..))))))))).)))))).))))

Structure

    u      U         CU          ccc   c 
cggc gucucU GUGCUUGAU  AACCAUGUGg   cgc u
|||| |||||| |||||||||  ||||||||||   ||| a
gucg caggga cgcgaacug  uugguacacu   gug u
    c      c         cc          aca   u 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602548.1: 9887318-9887400 [-]

Mature fru-miR-218a

• Accession: MIMAT0002993
• Description: Fugu rubripes fru-miR-218a mature miRNA
• Sequence: 11 - UUGUGCUUGAUCUAACCAUGUG - 32
• Evidence: not_experimental

References