Stem-loop fru-mir-338

Accession

MI0003335

Description

Fugu rubripes fru-mir-338 precursor miRNA

Sequence

ggauucucccugcaacaacauccuggugcugccugagucacuuucacaaacUCCAGCAUCAGUGAUUUUGUUGcgggggg
.....(((((((((((((.((((((((((((...((((...........))))))))))))).))).)))))))))))))

Structure

ggauu             c   -         ccu    cacu 
     cucccugcaacaa auc cuggugcug   gagu    u
     ||||||||||||| ||| |||||||||   ||||    u
     ggggggcGUUGUU UAG GACUACGAC   CUca    c
-----             U   U         ---    aaca 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602539.1: 7711117-7711196 [+]

Mature fru-miR-338

• Accession: MIMAT0003007
• Description: Fugu rubripes fru-miR-338 mature miRNA
• Sequence: 52 - UCCAGCAUCAGUGAUUUUGUUG - 73
• Evidence: not_experimental

References