Accession
MI0003339
Description
Fugu rubripes
fru-mir-153a precursor miRNA
Sequence
198041
reads,
1793.0
reads per million, 12 experiments
ccagugucAUUUUUGUGAUGUUGCAGCUaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCauugg
(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))
(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))
Structure
- GU -a aa
ccagug ucAUUUUUGUGAU UGCAGCU gu u
|||||| ||||||||||||| ||||||| || a
gguuaC AGUGAAAACACUG ACGUUga cg u
U AU cc ag
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
ref|NC_042294.1|: 7972704-7972774 [-]
Database links
Mature fru-miR-153a-5p
| Accession | MIMAT0052874 |
| Description | Fugu rubripes fru-miR-153a-5p mature miRNA |
| Sequence | 9 - AUUUUUGUGAUGUUGCAGCU - 28 |
| Evidence | not_experimental |
Mature fru-miR-153a-3p
| Accession | MIMAT0003011 |
| Description | Fugu rubripes fru-miR-153a-3p mature miRNA |
| Sequence | 45 - UUGCAUAGUCACAAAAGUGAUC - 66 |
| Evidence | not_experimental |
References
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