Stem-loop fru-mir-140

Accession

MI0003352

Description

Fugu rubripes fru-mir-140 precursor miRNA

Sequence

141918 reads, 1899.0 reads per million, 12 experiments

guCAGUGGUUUUACCCUAUGGUAGgugacaucaugcuguucuACCACAGGGUAGAACCACGGACggg
(((.(((((((((((((.((((((..((((......)))))))))).))))))))))))).)))...

Structure

---   A             A      gu    uc 
   guC GUGGUUUUACCCU UGGUAG  gaca  a
   ||| ||||||||||||| ||||||  ||||   
   CAG CACCAAGAUGGGA ACCAuc  uugu  u
ggg   G             C      --    cg 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042293.1|: 3962773-3962839 [+]

Mature fru-miR-140-5p

• Accession: MIMAT0003024
• Description: Fugu rubripes fru-miR-140-5p mature miRNA
• Sequence: 3 - CAGUGGUUUUACCCUAUGGUAG - 24
• Evidence: not_experimental

Mature fru-miR-140-3p

• Accession: MIMAT0052881
• Description: Fugu rubripes fru-miR-140-3p mature miRNA
• Sequence: 43 - ACCACAGGGUAGAACCACGGAC - 64
• Evidence: not_experimental

References