Stem-loop fru-mir-9-4

Accession

MI0003373

Description

Fugu rubripes fru-mir-9-4 precursor miRNA

Sequence

10074060 reads, 90257.0 reads per million, 12 experiments

ggguuaguuuuuaUCUUUGGUUAUCUAGCUGUAUGAguuuauguaauaucaUAAAGCUAGAGAACCGAAUGUAuaaacuaauucc
((((((((((.(((.(((((((.(((((((.(((((..((....))..))))).))))))).))))))).))).)))))))))).

Structure

-          u   C       A       G     gu  a 
 ggguuaguuu uaU UUUGGUU UCUAGCU UAUGA  uu u
 |||||||||| ||| ||||||| ||||||| |||||  ||  
 cuuaaucaaa AUG AAGCCAA AGAUCGA AUacu  aa g
c          u   U       G       A     au  u 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042304.1|: 6354626-6354710 [+]

Mature fru-miR-9-5p

• Accession: MIMAT0002910
• Description: Fugu rubripes fru-miR-9-5p mature miRNA
• Sequence: 14 - UCUUUGGUUAUCUAGCUGUAUGA - 36
• Evidence: not_experimental

Mature fru-miR-9-4-3p

• Accession: MIMAT0052820
• Description: Fugu rubripes fru-miR-9-4-3p mature miRNA
• Sequence: 52 - UAAAGCUAGAGAACCGAAUGUA - 73
• Evidence: not_experimental

References