Stem-loop fru-mir-103

Accession

MI0003377

Description

Fugu rubripes fru-mir-103 precursor miRNA

Sequence

221004 reads, 2266.0 reads per million, 12 experiments

cucuccgcuuuuAGCCUCUUUACAGUGCUGCCUUGucuaaucauguucaAGCAGCAUUGUACAGGGCUAUGAcagcguagag
((((.((((..(((((.((.(((((((((((.(((............)))))))))))))).)))))))....)))).))))

Structure

    c    --uu     U  U           C   ucuaa 
cucu cgcu    uAGCC CU UACAGUGCUGC UUG     u
|||| ||||    ||||| || ||||||||||| |||      
gaga gcga    AUCGG GA AUGUUACGACG Aac     c
    u    cAGU     -  C           -   uugua 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042298.1|: 11783385-11783466 [-]

Mature fru-miR-103-5p

• Accession: MIMAT0052890
• Description: Fugu rubripes fru-miR-103-5p mature miRNA
• Sequence: 13 - AGCCUCUUUACAGUGCUGCCUUG - 35
• Evidence: not_experimental

Mature fru-miR-103-3p

• Accession: MIMAT0003041
• Description: Fugu rubripes fru-miR-103-3p mature miRNA
• Sequence: 50 - AGCAGCAUUGUACAGGGCUAUGA - 72
• Evidence: not_experimental

References