Stem-loop fru-mir-22b

Accession

MI0003381

Description

Fugu rubripes fru-mir-22b precursor miRNA

Sequence

17067 reads, 194.0 reads per million, 12 experiments

guugccucacaguCGUUCUUCACUGGCUAGCUUUAuguccucugacccaugcuaAAGCUGCCAGUUGAAGAGCUGUuguguguaac
(((((..(((((..(((((((((((((.(((((((.((............)))))))))))))).))))))))..))))).)))))

Structure

     cu     uC        -     U       u  ccucu 
guugc  cacag  GUUCUUCA CUGGC AGCUUUA gu     g
|||||  |||||  |||||||| ||||| ||||||| ||      
caaug  guguU  CGAGAAGU GACCG UCGAAau cg     a
     -u     GU        U     -       -  uaccc 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042305.1|: 13907779-13907864 [-]

Mature fru-miR-22b-5p

• Accession: MIMAT0052892
• Description: Fugu rubripes fru-miR-22b-5p mature miRNA
• Sequence: 14 - CGUUCUUCACUGGCUAGCUUUA - 35
• Evidence: not_experimental

Mature fru-miR-22b-3p

• Accession: MIMAT0003045
• Description: Fugu rubripes fru-miR-22b-3p mature miRNA
• Sequence: 55 - AAGCUGCCAGUUGAAGAGCUGU - 76
• Evidence: not_experimental

References