Stem-loop fru-mir-202

Accession

MI0003425

Description

Fugu rubripes fru-mir-202 precursor miRNA

Literature search

2 open access papers mention fru-mir-202
(2 sentences)

Sequence

63004 reads, 892.0 reads per million, 11 experiments

uccuuuUUCCUAUGCAUAUACCUUUUUCAgauguaacuuuaaAGAGGCAUAGGGCAUGGGAAAAugggg
(((.(((((((((((.(((.(((((((.(((......)))))))))).)))..))))))))))).))).

Structure

-   u           -A   A       C   ug 
 ucc uuUUCCUAUGC  UAU CCUUUUU Aga  u
 ||| |||||||||||  ||| ||||||| |||   
 ggg AAAAGGGUACG  AUA GGAGAaa uuu  a
g   u           GG   C       -   ca 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042288.1|: 1201393-1201461 [+]

Mature fru-miR-202-5p

• Accession: MIMAT0052905
• Description: Fugu rubripes fru-miR-202-5p mature miRNA
• Sequence: 7 - UUCCUAUGCAUAUACCUUUUUCA - 29
• Evidence: not_experimental

Mature fru-miR-202-3p

• Accession: MIMAT0003073
• Description: Fugu rubripes fru-miR-202-3p mature miRNA
• Sequence: 43 - AGAGGCAUAGGGCAUGGGAAAA - 64
• Evidence: not_experimental

References