Stem-loop fru-mir-9-3

Accession

MI0003451

Description

Fugu rubripes fru-mir-9-3 precursor miRNA

Sequence

10033296 reads, 89887.0 reads per million, 12 experiments

ggagcuguguuucugUCUUUGGUUAUCUAGCUGUAUGAguguuaaauaccugucAUAAAGCUAGAUAACCGAAAGUAGAaau
........(((((((.((((((((((((((((.(((((((((...))))...))))).)))))))))))).)))))))))))

Structure

ggagcugu       U    -            G     ---    u 
        guuucug CUUU GGUUAUCUAGCU UAUGA   gugu  
        ||||||| |||| |||||||||||| |||||   |||| a
        uaaAGAU GAAA CCAAUAGAUCGA AUAcu   caua  
--------       -    G            A     guc    a 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042293.1|: 7479298-7479379 [+]

Mature fru-miR-9-5p

• Accession: MIMAT0002910
• Description: Fugu rubripes fru-miR-9-5p mature miRNA
• Sequence: 16 - UCUUUGGUUAUCUAGCUGUAUGA - 38
• Evidence: not_experimental

Mature fru-miR-9-3-3p

• Accession: MIMAT0052819
• Description: Fugu rubripes fru-miR-9-3-3p mature miRNA
• Sequence: 55 - AUAAAGCUAGAUAACCGAAAGUAGA - 79
• Evidence: not_experimental

References