Stem-loop fru-mir-204a

Accession

MI0003465

Description

Fugu rubripes fru-mir-204a precursor miRNA

Sequence

246499 reads, 3286.0 reads per million, 12 experiments

ugugaccugugggcUUCCCUUUGUCAUCCUAUGCCUggagcucggauaagGCAGGGACAGCAAAGGGAUGCUcagcugucaccacugacauc
.(((((...(((((.(((((((((..((((.(((((............)))))))))..))))))))).)))))...)))))..........

Structure

---------u     cug     U         CA    A     ggagc 
          gugac   ugggc UCCCUUUGU  UCCU UGCCU     u
          |||||   ||||| |||||||||  |||| |||||      
          cacug   acUCG AGGGAAACG  AGGG ACGga     c
cuacagucac     ucg     U         AC    -     auagg 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042293.1|: 9962768-9962859 [+]

Mature fru-miR-204a-5p

• Accession: MIMAT0003101
• Description: Fugu rubripes fru-miR-204a-5p mature miRNA
• Sequence: 15 - UUCCCUUUGUCAUCCUAUGCCU - 36
• Evidence: not_experimental

Mature fru-miR-204a-3p

• Accession: MIMAT0052919
• Description: Fugu rubripes fru-miR-204a-3p mature miRNA
• Sequence: 51 - GCAGGGACAGCAAAGGGAUGCU - 72
• Evidence: not_experimental

References